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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934420.1_cds_XP_016480492.1_71926
CDS Infomation

[gene=LOC107801651] [db_xref=GeneID:107801651] [protein=ribosomal RNA small subunit methyltransferase, chloroplastic-like isoform X1] [protein_id=XP_016480492.1] [location=join(29842..30090,30314..30463,30893..30949,31138..31239,33653..33737,34151..34203,34672..34755,34985..35095,35209..35274)] [gbkey=CDS]
Sequence

ATGCCTTGTTTGCTACATTCCCTGTTGCCACTCTCTTCAACGCCAAAACCTCTACTCTTG
GCAAAGTCGCCGGCGTACGATGGACCCGTTGGTGCCAATAGACCAAGACCCAAATCCCAT
CATACAATAACTGCAATATCTAAAACCAAAAGCAAAACAAGAATCAATAACAAGGCTGAG
GATGACTATCATGCCACCCTTAAAGCTCTCAACTCTAAAGGTCGTTTCCCAAGAAAGTCA
CTTGGGCAGCATTACATGCTGAATTCGTCAGTGAACGAGGAACTAGTTGCTGCTGCTGAT
ATACAAGAAGGAGATTTGGTGGTTGAAATTGGGCCTGGTACTGGTTCACTGACCAATGTT
CTTGTCGACGCTGGTGCCACTGTCCTTGCGATTGAAAAGGATCCCTACATGGCAGCCCTT
GTAATTGAGAGATTTTCCAGTCTGAACCACGTAAAGGTTTTGCAAGAGGATTTCACAAAA
TGTCATATACGCTCCCATTTGTCCACAATTTCGCAAAGTGGAAGGAATTCTTCAGGTGTG
AAACCACAATATGCAAAGGAGGAAGCAGCTGTGCGCTTGGTGGATTCATCCTCAGGGTCC
TCCGAGTATCGACCCATTAATATCTTCATCAACTTCTATTCAGATCCTGAATACAGATTT
AAGGTGCCAAGGACAAATTTCTTCCCACAACCTAAAGTCGATGCAGCTGTAGTTTCCTTC
AGACTGAAGCAACCTGTAGATTATCCTCCTGTTTCTTCTGCCAAAAGCTTCTTCTCAATG
GTCAATTCTGCTTTTAATGGAAAACGTAAGATGTTGCGAAAAACACTACAGCATATATGC
CCTTCCCTTGAGATTGAAGAAGCTCTTGTTGGTGCTGGTCTTCCATCCACGGCAAGGCCA
GAGGAGCTAGCGCTAGAAGATTTTGTAAGGCTGCATAATTCCATTGCTAAAGCCTAA

Peptide Sequence

PEP ID

XP_016480492.1
PEP Infomation

PREDICTED: ribosomal RNA small subunit methyltransferase, chloroplastic-like isoform X1 [Nicotiana tabacum]
Sequence

MPCLLHSLLPLSSTPKPLLLAKSPAYDGPVGANRPRPKSHHTITAISKTKSKTRINNKAE
DDYHATLKALNSKGRFPRKSLGQHYMLNSSVNEELVAAADIQEGDLVVEIGPGTGSLTNV
LVDAGATVLAIEKDPYMAALVIERFSSLNHVKVLQEDFTKCHIRSHLSTISQSGRNSSGV
KPQYAKEEAAVRLVDSSSGSSEYRPINIFINFYSDPEYRFKVPRTNFFPQPKVDAAVVSF
RLKQPVDYPPVSSAKSFFSMVNSAFNGKRKMLRKTLQHICPSLEIEEALVGAGLPSTARP
EELALEDFVRLHNSIAKA

Transcript Sequence

Gene sequence data has not been registered.